MyMBGD/Data Analysis
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[[MyMBGD]]
#contents
//-------------------
// 解析
//-------------------
* Data Analysis [#t3ded380]
//
** Mapping to default ortholog group/Genomaple alnalysis ...
//-------------------
// 実行 Mapping
//-------------------
*** Execution [#ie26e610]
+ Click "Execute Analysis" in "Genome Annotation by Ortho...
#ref(MyMBGD_home_analysis1.png,left,wrap,MyMBGD_home_anal...
~
+ Select user genome and click "Execute Analysis".
#ref(MBGD_Annalysis_1_input.png,left,wrap,MBGD_Annalysis_...
//-------------------
// 結果 Mapping
//-------------------
*** Result [#k814df04]
+ Click "Display Results" in "Genome Annotation by Orthol...
#ref(MyMBGD_home_result1.png,left,wrap,MyMBGD_home_result...
~
+ Click on the three buttons ("C", "O", "D") in the user...
・ C ... Show chromosome map
・ O ... Show orthology assigment
・ D ... Download orthology assignment
//Select user genomes and public genomes, and click "Comp...
#ref(MBGD_Annalysis_1_result1.png,left,wrap,MBGD_Annalysi...
~
//+ The result is displayed.
//#ref(MBGD_Annalysis_1_result2.png,left,wrap,MBGD_Annaly...
#ref(ChromosomeMap.png,left,wrap,ChromosomeMap,75%)
** Clustering (Comparison of closely related species) [#q...
//-------------------
// 実行 Clustering
//-------------------
*** Execution [#ff700ddc]
+ Click "Execute Analysis" in "Ortholog Clustering" secti...
#ref(MyMBGD_home_analysis2.png,left,wrap,MyMBGD_home_anal...
~
+ Select user genome and public genome, and then click "E...
+ The result is displayed.
#ref(MBGD_Annalysis_2_input.png,left,wrap,create new geno...
~
//-------------------
// 結果 Clustering
//-------------------
*** Result [#j73c8db4]
+ Click "Display Results" in "Ortholog Clustering" sectio...
#ref(MyMBGD_home_result2.png,left,wrap,MyMBGD_home_result...
~
+ Click on the two buttons ("V","R") in the analysis lis...
・V ... Clustering data
・R ... Corealign data
#ref(MBGD_Annalysis_2_result1.png,left,wrap,create new ge...
~
+ The result is displayed.
#ref(MBGD_Annalysis_2_result2.png,left,wrap,create new ge...
End:
[[MyMBGD]]
#contents
//-------------------
// 解析
//-------------------
* Data Analysis [#t3ded380]
//
** Mapping to default ortholog group/Genomaple alnalysis ...
//-------------------
// 実行 Mapping
//-------------------
*** Execution [#ie26e610]
+ Click "Execute Analysis" in "Genome Annotation by Ortho...
#ref(MyMBGD_home_analysis1.png,left,wrap,MyMBGD_home_anal...
~
+ Select user genome and click "Execute Analysis".
#ref(MBGD_Annalysis_1_input.png,left,wrap,MBGD_Annalysis_...
//-------------------
// 結果 Mapping
//-------------------
*** Result [#k814df04]
+ Click "Display Results" in "Genome Annotation by Orthol...
#ref(MyMBGD_home_result1.png,left,wrap,MyMBGD_home_result...
~
+ Click on the three buttons ("C", "O", "D") in the user...
・ C ... Show chromosome map
・ O ... Show orthology assigment
・ D ... Download orthology assignment
//Select user genomes and public genomes, and click "Comp...
#ref(MBGD_Annalysis_1_result1.png,left,wrap,MBGD_Annalysi...
~
//+ The result is displayed.
//#ref(MBGD_Annalysis_1_result2.png,left,wrap,MBGD_Annaly...
#ref(ChromosomeMap.png,left,wrap,ChromosomeMap,75%)
** Clustering (Comparison of closely related species) [#q...
//-------------------
// 実行 Clustering
//-------------------
*** Execution [#ff700ddc]
+ Click "Execute Analysis" in "Ortholog Clustering" secti...
#ref(MyMBGD_home_analysis2.png,left,wrap,MyMBGD_home_anal...
~
+ Select user genome and public genome, and then click "E...
+ The result is displayed.
#ref(MBGD_Annalysis_2_input.png,left,wrap,create new geno...
~
//-------------------
// 結果 Clustering
//-------------------
*** Result [#j73c8db4]
+ Click "Display Results" in "Ortholog Clustering" sectio...
#ref(MyMBGD_home_result2.png,left,wrap,MyMBGD_home_result...
~
+ Click on the two buttons ("V","R") in the analysis lis...
・V ... Clustering data
・R ... Corealign data
#ref(MBGD_Annalysis_2_result1.png,left,wrap,create new ge...
~
+ The result is displayed.
#ref(MBGD_Annalysis_2_result2.png,left,wrap,create new ge...
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